Douglas Capone
Research & Practice Areas
Marine biochemistry, microbiology, biogeochemistry and microbial ecology.
The microbial ecology of nitrogen transformations with particular emphasis on nitrogen fixation.
Pollutant impact on the microbiota of marine sediments and the role of microorganisms in environmental detoxification.
Center, Institute & Lab Affiliations
- Lawrence Livermore National Laboratory, Collaborator
- Wrigley Institute for Environmental Studies, Member of Wrigley affiliated faculty
Biography
Douglas G. Capone received his Ph.D. in Oceanography from the Rosenstiel School of Marine and Atmospheric Sciences of the University of Miami (Fl) in 1978. He joined the faculty of the Marine Sciences Research Center of Stony Brook University (NY) in 1979 and the Center for Environmental Science of the University of Maryland in 1987. Since 1999, he has held the Wrigley Chair of Environmental Biology at the University of Southern California and is currently Chair of the Department of Biological Sciences. He is a Fellow of the American Academy of Microbiology and the American Association for the Advancement of Science.
His research focuses on the role and importance of marine microbes in major biogeochemical cycles, particularly those of nitrogen and carbon, both from the perspective of the fundamental ecology of these ecosystems and their physical, chemical and biotic factors controls. Capone has studied diverse systems including the tropical open ocean, coral reefs, mangroves, temperate estuaries, groundwater aquifers and Antarctic snows. He has participated in over 30 major oceanographic expeditions to the tropical Atlantic, Caribbean and Pacific Oceans including to the Great Barrier Reef, over 10 as chief scientist. He has also conducted research at remote field stations in the Caribbean, Great Barrier Reef, McMurdo and South Pole Stations of the US Polar Program.
He uses diverse approaches and technologies (e.g. of physiology, biochemistry, molecular biology, geochemistry and remote sensing). He has published over 150 peer-reviewed articles in scientific journals including Science and Nature. His research has been supported by NSF, NASA, NOAA, EPA and USGS (among others). In 1999, he received and led two major NSF grants targeting Biocomplexity in the Environment in which he organized multi-investigator teams composed of biological, chemical, geochemical and physical oceanographers, atmospheric chemists and modelers. He continues to collaborate with researchers in diverse fields and countries (e.g. Australia, France, Germany).
Professor Capone is a leading expert on the marine N cycle. He is called upon frequently to provide definitive overviews on the subject. In the last year, he gave synthesis papers at international workshops in England and India. He produced a still highly regarded edited volume on the marine nitrogen cycle (Nitrogen in the Marine Environment, 1983, Academic Press) and has just completed the updated second edition, now in press, as lead Editor.
In particular, he has shown nitrogen fixation to be a key biogeochemical process in several marine ecosystems. He documented the quantitative importance of nitrogen fixation in tropical seagrass ecosystems during his Ph.D. studies. More recently, he has focused on open ocean systems and organisms such as the cyanobacterium Trichodesmium, ubiquitous through the tropical ocean and a substantial source of fixed nitrogen. His work has revealed how nitrogen fixation may be a major determinant of the capacity of the oligotrophic tropical oceans to take up atmospheric carbon dioxide.
Professor Capone has taken a leadership role in national environmental research programs. He has also made a major contribution to the development of human resources in oceanography and environmental science. He has successfully mentored 11 M.S., 12 Ph.D. students and 12 Postdoctoral fellows as well as numerous undergraduates. His students have gone on in the fields of Chemical and Biological Oceanography, Hydrology, and Environmental Microbiology. Over half of his graduate students (8) and postdoctoral associates (7) have been female.
Education
- Ph.D. Biological Oceanography, University of Miami, Rosensteil School of Marine & Atmospheric Sciences, 12/1978
- B.S. Biology, University of Miami, 12/1973
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Tenure Track Appointments
- Professor, Center for Environmental Sciences, University of Maryland, 07/01/1987 – 08/01/1999
- Associate Professor, Marine Sciences Research Center, Stony Brook University, 09/01/1984 – 06/01/1987
Research, Teaching, Practice, and Clinical Appointments
- Research Assistant Professor, Marine Sciences Research Center, Stony Brook University, 1979-03-01-1984-08-31
Visiting and Temporary Appointments
- Centre National de la Recherche Scientifique (CNRS) Fellow, Laboratoire d’Océanographie de Villefranche, 09/01/2006-02/28/2007
- Visiting Scientist, Columbia University, Lamont-Doherty Earth Observatory, 03/08/2007-04/08/2007
- Research Collaborator, Department of Chemistry, Brookhaven National Laboratory, 1984-1991
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Summary Statement of Research Interests
Learning about bacteria’s ability to promote the absorption of the greenhouse gas may shed light on how the oceans can mitigate the effects of pollution. That’s partially why Capone researches the role and importance of marine bacteria in major biogeochemical cycles particularly those of nitrogen and carbon, as well as the response of these populations to, and interactions with, various environmental perturbations. Professor Capone is currently studying the importance of nitrogen fixation in the biogeochemistry of the oceans and the major groups of organisms involved in this process. He is also involved in other studies including experimental manipulation of nutrient dynamics in coral reefs systems, the examination of South Pole snows for active populations of bacteria, and analyses of microbial processes in mangrove ecosystems.
Research Keywords
Marine microbial ecology, biogeochemistry, nitrogen fixation, biocomplexity, mangrove, ecosystem, bacteria
Research Specialties
Marine biochemistry, microbiology, biogeochemistry and microbial ecology.
The microbial ecology of nitrogen transformations with particular emphasis on nitrogen fixation.
Pollutant impact on the microbiota of marine sediments and the role of microorganisms in environmental detoxification.
Detailed Statement of Research Interests
Douglas G. Capone’s research focuses on the role and importance of marine microbes in major biogeochemical cycles, particularly those of nitrogen and carbon, both from the perspective of the fundamental ecology of these ecosystems and the physical, chemical and biotic factors controlling these pathways in the environment. Capone has studied diverse systems including the tropical open ocean, coral reefs, mangroves, temperate estuaries, groundwater aquifers and Antarctic snows. He has participated in over 30 major oceanographic expeditions to the tropical Atlantic, Caribbean and Pacific Oceans including to the Great Barrier Reef, and has served as the chief scientist on over 10 of these missions. He has also conducted research at remote field stations in the Caribbean, Great Barrier Reef, McMurdo and South Pole Stations of the US Polar Program.
His laboratory has taken advantage of diverse approaches and technologies (e.g. of physiology, biochemistry, molecular biology, geochemistry and remote sensing). He has published over 150 peer-reviewed articles in scientific journals including Science and Nature. Professor Capone’s research has been supported by NSF, NASA, NOAA, EPA and USGS (among others). In 1999, he received and led two major NSF grants targeting Biocomplexity in the Environment. For these two programs, he organized multi-national teams composed of biological, chemical, geochemical and physical oceanographers, atmospheric chemists and modelers. He collaborates with researchers in diverse fields and countries (e.g. Australia, France, Germany).
Professor Capone is a leading expert on the marine N cycle. He is called upon frequently to provide definitive overviews on the subject. For example, he recently participated and gave synthesis papers at international workshops in England and India. He produced a still highly regarded edited volume on the marine nitrogen cycle (Nitrogen in the Marine Environment, 1983, Academic Press) and has just completed the updated second edition, now in press, as lead Editor.
Capone has had a particularly major impact in raising awareness of nitrogen fixation as a key biogeochemical process in several marine ecosystems. At the outset of his career, he documented the quantitative importance of nitrogen fixation in tropical seagrass ecosystems. More recently, he has focused on open ocean systems and organisms such as the cyanobacterium Trichodesmium, ubiquitous through the tropical ocean, and a substantial source of fixed nitrogen.His work has revealed how nitrogen fixation may be a major determinant of the capacity of the oligotrophic tropical oceans to take up atmospheric carbon dioxide. -
Contracts and Grants Awarded
- Collaborative Research: New Approaches to New Production, (NSF Ocean Sciences), D.G. Capone, Alyson Santoro (U. Md.), $755,454, 08/01/2014 – 07/31/2017
- Collaborative Research: Importance of Heterotrophic and Phototrophic N2 Fixation in the McMurdo Dr, (NSF Polar Programs), D.G. Capone, $490,000, 08/01/2013 – 07/31/2017
- Nitrogen Dynamics in the Red Sea, (King Abdullah University of Science & Technology), D.G. Capone, $548,861, 07/01/2013 – 06/30/2017
- EAGER: Direct Identification and Characterization of Marine Heterotrophic Nitrogen Fixers by Stable, (NSF Ocean Sciences), D.G. Capone, $295,000, 06/01/2013 – 05/31/2016
USC Funding
- College 2020 Research Clusters. Climate Change in the Southern California Bight: Integrating Science and Societal Implications: : We aim identify relevant environmental data sets and for ways to combine these data sets to create a comprehensive picture of changes in So. Cal’s coastal waters, $300000, 07/01/2010 – 06/30/2013
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Conference Presentations
- Emerging Patterns of Nitrogen Fixation in the Oceans , Biennial Int. Symp. of Environmental Biogeochem.Keynote Lecture, Int. Soc. of Environmental Biogeochem., Invited, Istanbul, Turkey, 09/27/2011
- Emerging patterns of oceanic nitrogen fixation , Agouron Institute N Cycle SymposiumLecture/Seminar, Agouron Institute, Invited, Scotsdale AZ, 11/2009
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- RECENT ABSTRACTS
2012
Hammond, D.E.; Prokopenko, M.G.; Yeung, L.Y.; Berelson, W.M.; Stanley, R.Haskell II, W.Z.; Knapp, A.N.; Rollins, N.Young, E.D.; Capone, D.G.; NET COMMUNITY AND GROSS PHOTOSYNTHETIC PRODUCTION RATES IN THE ETSP, BASED ON O2/AR RATIOS AND TRIPLE OXYGEN ISOTOPIC COMPOSITION OF DISSOLVED O2. Ocean Sciences Meeting, Salt Lake City, Feb. 2012.
Berelson, W.Rollins, N.Haskell, W.Tems, C.Wolfe, C.Prokopenko, M.Knapp, A.N.; Casciotti, K.L.; Hammond, D.E.; Capone, D.G.; SEDIMENTATION AND BIOGENIC MATTER REMINERALIZATION IN THE EASTERN TROPICAL SOUTH PACIFIC (ETSP); SEDIMENT TRAP AND SEDIMENT PORE WATER FLUXES. Ocean Sciences Meeting, Salt Lake City, Feb. 2012.
Knapp, A.N.; Casciotti, K.L.; Buchwald, C.Bonnet, S.Dekaezemacker, J.Gunderson, T.Prokopenko, M.Berelson, W.M.; Capone, D.G.; QUANTIFYING THE IMPORTANCE OF NITRATE AND N2 FIXATION AS SOURCES OF NEW N FOR EXPORT PRODUCTION IN THE EASTERN TROPICAL SOUTH PACIFIC USING N ISOTOPE BUDGETS. Ocean Sciences Meeting, Salt Lake City, Feb. 2012.
Turk-Kubo, K.A.; Bonnet, S.Dekaezemacker, J.Foster, R.Liss, A.Capone, D.G.; Zehr, J.P.; NITROGEN FIXATION AND THE DIVERSITY, ABUNDANCE AND NITROGENASE (NIFH) GENE EXPRESSION OF DIAZOTROPHS IN THE EASTERN TROPICAL SOUTH PACIFIC. Ocean Sciences Meeting, Salt Lake City, Feb. 2012.
Dekaezemacker, J.Bonnet, S.Turk-Kubo, K.A.; Moutin, T.Grosso, O.Knapp, A.N.; Capone, D.G.; ORGANIC/INORGANIC NUTRIENT CONTROL OF N2 FIXATION IN THE EASTERN TROPICAL SOUTH PACIFIC. Ocean Sciences Meeting, Salt Lake City, Feb. 2012.
Haskell II, W.Z.; Kadko, D.Berelson, W.M.; Hammond, D.E.; Knapp, A.N.; Capone, D.G.; UPWELLING VELOCITIES AND EDDY DIFFUSIVITY FROM 7BE MEASUREMENTS USED TO COMPARE VERTICAL NUTRIENT FLUXES TO EXPORT POC FLUX IN THE ETSP. Ocean Sciences Meeting, Salt Lake City, Feb. 2012.
Liss, A.M.; Tiahlo, M.Sañudo-Wilhelmy, S.A.; Capone, D.G.; THE INFLUENCE OF NICKEL ON NITROGEN AND CARBON FIXATION RATES IN THE EASTERN TROPICAL SOUTH PACIFIC. Ocean Sciences Meeting, Salt Lake City, Feb. 2012.
Capone, D.G.; Tiahlo, M.Knapp, A.Moutin, T.Berelson, W.CARBON FIXATION AND PHOSPHORUS TURNOVER IN SURFACE WATERS OF THE EASTERN TROPICAL SOUTH PACIFIC (ETSP) Ocean Sciences Meeting, Salt Lake City, Feb. 2012.
Hamersley, M. R.; Turk, K. A.; Leinweber, A.; Gruber, N.; Zehr, J. P.; Gunderson, T.; Capone, D. G.; NITROGEN FIXATION WITHIN THE WATER COLUMN OF HYPOXIC BASINS OF THE SOUTHERN CALIFORNIA BIGHT Ocean Sciences Meeting, Salt Lake City, Feb. 2012.
Foster, R. A.; Franzke, D.; Padilla, C.; Tiahlo, M.; Turk-Kubo, K.; Capone, D. G.; Zehr, J. P.; NANOSIMS IMAGING OF N, C, AND P ASSIMILATION IN FIELD POPULATIONS OF DIATOM-RICHELIA SYMBIOSES AND TRICHODESMIUM SPP. FROM THE WTNA Ocean Sciences Meeting, Salt Lake City, Feb. 2012.
Yager, P. L.; Coles, V. J.; Goes, J.; Montoya, J.; Steinberg, D.; Berelson, W.; Hood, R.; Capone, D.; Carpenter, E.; ANACONDAS: AMAZON INFLUENCE ON THE ATLANTIC: CARBON EXPORT FROM NITROGEN FIXATION BY DIATOM SYMBIOSES Ocean Sciences Meeting, Salt Lake City, Feb. 2012.
Morando Jr, M. B.; Foster, R. A.; Tiahlo, M.; Landrum, J.; Gunderson, T. E.;
Capone, D. G.; PHOSPHATE LIMITATION AND P UPTAKE IN TRICHODESMIUM SPP. ALONG A TRANSECT OF THE AMAZON RIVER PLUME. Ocean Sciences Meeting, Salt Lake City, Feb. 2012.
Barada, L. P.; Capone, D. G.; Sanudo-Wilhelmy, S. A.; DISTRIBUTION OF B VITAMINS IN THE WESTERN TROPICAL NORTH ATLANTIC. Ocean Sciences Meeting, Salt Lake City, Feb. 2012.2011
Romero I.C., N. Klein, L.Barada, J. Vo, A.Liss, L. Cutter, T.Gunderson, M.Tiahlo, J.Glass, S.Sanudo-Wilhelmy and D.G.Capone. Nutrient controls on nitrogen fixation and assimilation in Southern California Lakes. Aquatic Sciences Meeting of ASLO, San Juan, Feb 2011
Knapp A.N., S. Bonnet, J. Dekaezemacker, K. Casciotti, J.A. Sohm, D.G. Capone. Sensitivity of Trichodesmium and Crocosphaera spp. Growth and N2 fixation rates to macro nutrient variation in batch cultures. Aquatic Sciences Meeting of ASLO, San Juan, Feb 20112010
Knapp, A.N., D.M. Sigman, F. Lipschultz, A. B. Kustka, D.G. Capone. Isotopic analysis of bulk, LMW, and HMW DON d15N indicates recycled nitrogen release from marine DON. AGU Fall meeting, San Francisco
Prokopenko M.G., L.Y. Yeung, W. M. Berelson, J.C. Fleming, N. Rollins, E. Young, W.Z. Haskell II, D.E. Hammond, D.G. Capone. Net Community and Gross Photosynthetic Production rates in the Eastern Tropical South Pacific, as determined from O2/Ar ratios and triple oxygen isotopic composition of dissolved O2. AGU Fall meeting, San Francisco
Haskell II, W.Z., W.M. Berelson, D.E. Hammond, M. G. Prokopenko, L.Y. Yeung, D.G. Capone. Export POC flux calculated from 234Th measurements, sediment traps and O2 supersaturation in the Eastern Tropical South Pacific. AGU Fall meeting, San Francisco
- RECENT ABSTRACTS
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Book
- Capone, D. G., Bronk, D., Mulholland, M., Carpenter, E. J. (2008). Nitrogen in the Marine Environment, 2nd edition. San Diego: Academic Press/ Elsevier.
Book Chapters
- Mulholland, M. R., Capone, D. G. Dinitrogen Fixation in the Indian Ocean. Washington, D.C./ American Geophysical Union: Indian Ocean Biogeochemical Processes and Ecological Variability; 2009.
- Carpenter, E. J., Capone, D. G. (2008). Nitrogen Fixation in the Marine Environment. 2nd pp. 141-198. San Diego: Elsevier, Academic Press.
Journal Article
- Niederberger, T., Sohm, J. A., Gunderson, T., Tirindelli, J., Capone, D. G., Carpenter, E. J., Cary, C. S. (2016). Carbon-fixation rates and associated microbial communities residing in arid and ephemerally wet Antarctic Dry Valley soils. Frontiers in Microbiology. Vol. 10.3389/fmicb.2015.00009
- Knapp, A. N., Casciotti, K. L., Berelson, W. M., Prokopenko, M. G., Capone, D. G. (2016). Low rates of nitrogen fixation in eastern tropical South Pacific surface waters. Proceedings of the National Academy of Sciences. Vol. 113 (16), pp. 4398-4403.
- Bonnet, S., Gregori, G., Barani, A. S., Mostefaoui, S., Cornet-Barthaux,, , V., D., J., C. B., Dupouy, C., Rodier, M., Gérard, P., Capone, D. G. (2016). Efficient transfer of recently fixed N2 from Trichodesmium to non-diazotrophic phytoplankton revealed by NanoSIMS. Limnology & Oceanography.
- Romero, I. C., Jacobson-Meyers, M. E., Fuhrman, J. A., Capone, D. G. (2015). Phylogenetic Diversity of Diazotrophs along an Experimental Nutrient Gradient in Mangrove Sediments. Journal of Marine Science and Engineering. Vol. 3 (3), pp. 699-719.
- Niederberger, T. D., Sohm, J. A., Gunderson, T. E., Parker, A. E., Tirindelli, J., Capone, D. G., Carpenter, E. J., Cary, S. C. (2015). Microbial community composition of transiently wetted Antarctic Dry Valley soils. Frontiers in Microbiology. Vol. 6, pp. 10.3389/fmicb.2015.00009.
- Loick-Wilde, N., Weber, S. C., Conroy, B. J., Capone, D. G., Coles, V. J., Medeiros, P. M., Steinberg, D. K., Montoya, J. P. (2015). Nitrogen sources and net growth efficiency of zooplankton in three Amazon River plume food webs. Limnology and Oceanography. Vol. 61, pp. 460-481.
- Haskell, W. Z., Kadko, D., Hammond, D. E., Knapp, A. N., Prokopenko, M. G., Berelson, W. M., Capone, D. G. (2015). Upwelling velocity and eddy diffusivity from 7 Be measurements used to compare vertical nutrient flux to export POC flux in the Eastern Tropical South Pacific. Marine Chemistry. Vol. 168, pp. 140-150.
- Hamersley, M. R., Sohm, J. A., Burns, J. A., Capone, D. G. (2015). Nitrogen fixation associated with the decomposition of the giant kelp Macrocystis pyrifera. Aquatic Botany. Vol. 125, pp. 57-63.
- Capone, D. G., Berelson, W., Haskell II, W., Prokopenko, M., Knapp, A., Hammond, D., Rollins, N., Capone, D. (2015). Biogenic particle flux and benthic remineralization in The Eastern Tropical South Pacific. Deep Sea Research Part I: Oceanographic Research Papers.
- Grimes, D. J., Ford, T. E., Colwell, R. R., Baker-Austin, C., Martinez-Urtaza, J., Subramaniam, A., Capone, D. G. (2014). Viewing Marine Bacteria from Orbit. Microbial Ecology. pp. DOI 10.1007/s00248-013-0363-4.
- Goes, J. I., Gomes, H. d., Chekalyuk, A. M., Carpenter, E. J., Montoya, J. P., Coles, V. J., Yager, P. L., Berelson, W. M., Capone, D. G., Foster, R. A. (2014). Influence of the Amazon River discharge on the biogeography of phytoplankton communities in the western tropical north Atlantic. Progress in Oceanography. Vol. 120, pp. 29-40.
- Capone, D. G. (2014). An iron curtain in the Atlantic Ocean forms a biogeochemical divide. Proceedings of the National Academy of Sciences. Vol. 111 (4), pp. 1231-1232.
- Yoshikawa, C., Coles, V. J., Hood, R. R., Capone, D. G., Yoshida, N. (2013). Modeling how surface nitrogen fixation influences subsurface nutrient patterns in the North Atlantic. Journal of Geophysical Research- Oceans. Vol. 118 (DOI: 10.1002/jgrc.20165), pp. 2520–2534.
- Turk-Kubo, K. A., Karamchandani, M., Foster, R., Capone, D. G., Zehr, J. P. (2013). The paradox of marine heterotrophic nitrogen fixation: Abundances of heterotrophic diazotrophs do not account for nitrogen fixation rates in the Eastern Tropical South Pacific. Environmental Microbiology. pp. doi:10.1111/1462-2920.12346.
- Romero, I. C., Klein, N. J., Sanudo-Wilhelmy, S. A., Capone, D. G. (2013). Potential trace metal co-limitation controls on N2 fixation and assimilation in lakes with varying trophic status. Frontiers in Microbiology. Vol. 4, pp. doi: 10.3389/fmicb.2013.00054.
- Haskell, W. Z., Berelson, W. M., Hammond, D. E., Capone, D. G. (2013). Particle sinking dynamics and POC fluxes in the Eastern Tropical South Pacific based on 234Th budgets and sediment trap deployments. Deep Sea Research. Vol. 81, pp. 1-13.
- Dekaezemacker, J., Bonnet, S., Grosso, O., Moutin, T., Bressac, M., Capone, D. G. (2013). Evidence of active dinitrogen fixation in surface waters of the eastern tropical South Pacific during El Niño and La Niña events and evaluation of its potential nutrient controls. Global Biogeochemical Cycles. Vol. 27, pp. 1-12, DOI: 10.1002/gbc.20063, 2013.
- Capone, D. G., Hutchins, D. A. (2013). Microbial biogeochemistry of coastal upwelling regimes in a changing ocean. Nature Geoscience. Vol. 6 (9), pp. 711-717.
- Bonnet, S., Dekaezemacker, J., Moutin, T., Knapp, A. N., Hamersley, R., Grosso, O., Capone, D. G. (2013). Aphotic N2 Fixation in the Eastern Tropical South Pacific Ocean. PLoS One. Vol. 8 (12), pp. e81265.
- Barada, L. P., Cutter, L., Montoya, J. P., Webb, E. A., Capone, D. G., Sanudo-Wilhelmy, S. A. (2013). The distribution of thiamin and pyridoxine in the western tropical North Atlantic Amazon River plume. Frontiers in Microbiology. Vol. 4, pp. doi: 10.3389/fmicb.2013.00025.
- Yeung, L. Y., Berelson, W. M., Young, E. D., Prokopenko, M. G., Rollins, N., Coles, V. J., Montoya, J. P., Carpenter, E. J., Steinberg, D. K., Foster, R. A., Capone, D. G., Yager, P. L. (2012). Impact of diatom-diazotroph associations on carbon export in the Amazon River plume. Geophysical Research Letters. pp. doi:10.1029/2012GL053356.
- Niederberger, T. D., Sohm, J. A., Tirindelli, J., Gunderson, T., Capone, D. G., Carpenter, E. J., Cary, S. C. (2012). Diverse and highly active diazotrophic assemblages inhabit ephemerally wetted soils of the Antarctic Dry Valleys. Microbial Ecology. Vol. 10.1111/j.1574-6941.2012.01390.x
- Luo, Y., Scott C. Doney, L. A., Bode, A., Bonnet, S., Boström, K. H., Böttjer, D., Capone, D. G., Carpenter, E. J., Chen, Y. L., Church, M. J., Dore, J. E., Falcón, L. I., Fernández, A., Foster, R. A., Furuya, K., Gundersen, K., Hynes, A. M., Karl, D. M., Kitajima, S., Langlois, R. J., LaRoche, J., Letelier, R. M., Marañón, E., McGillicuddy Jr., D. J., Moisander, P. H., Moore, C. M., Mouriño-Carballido, B., Mulholland, M. R., Needoba, J. A., Orcutt, K. M., Poulton, A. J., Raimbault, P., Rees, A. P., Riemann, L., Shiozaki, T., Subramaniam, A., Tyrrell, T., Turk-Kubo, K. A., Varela, M., Webb, E. A., White, A. E., Zehr, J. P. (2012). Database for Diazotrophs in Global Ocean: Abundances, Biomasses and Nitrogen Fixation Rates. Earth Syst. Sci. Data Discuss. Vol. 4, pp. 47-73, doi:10.5194/essd-4-47-2012, 2012.
- Knapp, A. N., Dekaezemacker, J., Bonnet, S., Sohm, J. A., Capone, D. G. (2012). Sensitivity of Trichodesmium and Crocosphaera spp. growth and N2 fixation rates to NO3- and PO43- concentration and ratios in batch cultures. Aquatic Microbial Ecology. Vol. 66: doi: 10.3354/ame01577, pp. 223-236.
- Knapp, A. N., Sigman, D. M., Kustka, A., Sanudo-Wilhelmy, S., Capone, D. G. (2012). The distinct nitrogen isotopic compositions of low and high molecular weight marine DON. Marine Chemistry. Vol. 136-137, pp. 24-33.
- Knapp, A. N., Sigman, D. M., Lipschultz, F., Kustka, A. B., Capone, D. G. Isotopic evidence for recycled nitrogen release from bulk marine DON. Isotopic evidence for recycled nitrogen release from bulk marine DON. , Global Biogeochemical Cycles2011; Vol. 25: 10.1029/2010GB003878.
- Sohm, J. A., Subramaniam, A., Gunderson, T., Carpenter, E. J., Capone, D. G. Nitrogen fixation by Trichodesmium spp. and unicellular diazotrophs in the North Pacific Subtropical Gyre. Nitrogen fixation by Trichodesmium spp. and unicellular diazotrophs in the North Pacific Subtropical Gyre. , Journal of Geophysical Research- Biogeosciences2011; 10.1029/2010JG001513.
- Romero, I. C., Jacobson, M., Fuhrman, J. A., Fogel, M., Capone, D. G. Long-term nitrogen and phosphorus fertilization effects on N2 fixation rates and nifH gene community patterns in mangrove sediments. Long-term nitrogen and phosphorus fertilization effects on N2 fixation rates and nifH gene community patterns in mangrove sediments. , Marine Ecology2011; 10.1111/j.1439-0485.2011.00465.x.
- Cowan, D. A., Sohm, J. A., Makhalanyane, T., Capone, D. G., Green, T. G., Cary, S. C., Tuffin, I. M. Hypolithic communities: important nitrogen sources in Antarctic desert soils. Hypolithic communities: important nitrogen sources in Antarctic desert soils. , Environmental Microbiology Reports2011; 10.1111/j.1758-2229.2011.00266.x.
- Sohm, J. A., Webb, E. A., Capone, D. G. Emerging Patterns of Marine Nitrogen Fixation. Emerging Patterns of Marine Nitrogen Fixation. , Nature Reviews Microbiology2011; Vol. 9: 499-508.
- Collins, L. E., Berelson, W. M., Hammond, D., Knapp, A., Schwartz, R., Capone, D. G. Particle fluxes in San Pedro Basin, California: A four-year record of sedimentation and physical forcing. Particle fluxes in San Pedro Basin, California: A four-year record of sedimentation and physical forcing. , Deep-Sea Research I2011; Vol. 58: 818-914.
- Hamersley, M. R., Gunderson, T., Leinweber, A., Gruber, N., Capone, D. G. Nitrogen fixation in the water column of two hypoxic basins within the Southern California Bight. Nitrogen fixation in the water column of two hypoxic basins within the Southern California Bight. , Aquatic Microbial Ecology2011; Vol. 63: 193-205.
- Bonnet, S., Webb, E. A., Panzeca, C., Karl, D. M., Capone, D. G., Sañudo-Wilhelmy, S. A. Globally Distributed Cyanobacteria are Significant Producers of Vitamin B12 in the Marine Environment. Globally Distributed Cyanobacteria are Significant Producers of Vitamin B12 in the Marine Environment. , Limnology and Oceanography2010; Vol. 55: 1959–1964.
- Sohm, J. A., Capone, D. G. (2010). Intrabasin differences in phosphorus pools, cycling and stress in the tropical North Atlantic Ocean: patterns and possible causes. Global Biogeochem. Cycles. Vol. 24, pp. DOI: 10.1029/2008GB003414.
- Bertics, V. J., Sohm, J. A., Chow, C. T., Capone, D. G., Fuhrman, J. A., Ziebis, W. Burrowing deeper into benthic nitrogen fixation. Burrowing deeper into benthic nitrogen fixation. , Marine Ecology Progress Series2010; Vol. 409: 1–15.
- Finzi, J. A., Pett-Ridge, J., Weber, P., Popa, R., Fallon, S., Nealson, K., Gunderson, T., Capone, D. G. (2009). Fixation and fate of carbon and nitrogen in the cyanobacterium Trichodesmium using nanometer Secondary Ion Mass Spectrometry (NanoSIMS). Proceedings of the National Academy of Science. pp. 10.1073/pnas.0810547106.
- Bonnet, S., Biegala, I., Dutrieux, P., Slemons, L. O., Capone, D. G. Nitrogen fixation in the western equatorial Pacific. Nitrogen fixation in the western equatorial Pacific. , Global Biogeochem. Cycles2009; Vol. doi(10): 029/2008GB003439,.
- Duce, R., LaRoche, J., Altier, K., Arrigo, K., Baker, A., Capone, D. G., et, a. (2008). Impacts of Atmospheric Anthropogenic Nitrogen on the Open Ocean. Science. Vol. 320, pp. 893-897.
- Subramaniam, A., Yager, P., Carpenter, E., Mahaffey, C., Bjorkman, K., Cooley, S., Montoya, J., Sanudo-Wilhelmy, S., Shipe, R., Capone, D. G. (2008). Amazon River enhances diazotrophy and carbon sequestration in the tropical North Atlantic Ocean. Proceedings, National Academy of Sciences. Vol. 105, pp. DOI 10.1073/pnas.0710279105.
- Sohm, J. A., Mahaffey, C., Capone, D. G. (2008). Assessment of relative phosphorus limitation of Trichodesmium spp. in the North Pacific and Atlantic and the north coast of Australia. Limnology and Oceanography. Vol. 53, pp. 2495-2502.
- Capone, D. G. (2008). The marine nitrogen cycle. Microbe. Vol. 3, pp. 186-192.
- Foster, R. A., Capone, D. G., Carpenter, E. J., Mahaffey, C., Subramaniam, A., Zehr, J. P. (2007). Influence of the Amazon River plume on distributions of free-living and symbiotic cyanobacteria in the western tropical north Atlantic Ocean. Limnology and Oceangraphy. Vol. 52, pp. 517-532.
- Sohm, J., Capone, D. G. (2006). Phosphorus dynamics of the tropical and subtropical north Atlantic: Trichodesmium versus bulk plankton. Marine Ecology: Progress Series. Vol. 317, pp. 21-28.
Other
- Knapp, A. N., Casciotti, K. L., Buchwald, C., Bonnet, S., Dekaezemacker, J., Gunderson, T., Prokopenko, M., Berelson, W. M., Capone, D. G. (2012). Quantifying the importance of nitrate and N2 fixation as sources of new n for export in the eastern tropical South Pacific using N isotope budgets. Ocean Sciences MeetingASLO.
- Berelson, W., Rollins, N., Haskell, W., Tems, C., Wolfe, C., Prokopenko, M., Knapp, A. N., Casciotti, K. L., Hammond, D. E., Capone, D. G. (2012). Sedimentation and biogenic matter mineralization in the eastern tropical South Pacific (ETSP) and sediment pore water fluxes. Ocean Sciences MeetingASLO.
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- Fellow (or Equivalent) of National Society in Discipline, American Geophysical Union, 2008
- Fellow (or Equivalent) of National Society in Discipline, California Academy of Science, 2008
- American Association for the Advancement of Science Fellow, American Association for the Advancement of Science, 2007
- Fellow (or Equivalent) of National Society in Discipline, American Academy of Microbiology, 2004
- USC Endowed Chair, William and Julie Wrigley Chair in Environmental Studies, 1999/09/01-2019/08/15
- USC Raubenheimer Outstanding Senior Faculty Award, 2015-2016
- Dupont Industrial Biosciences Award in Applied and Enviornmental Microbiology, 2014
- Fellow, Centre National de la Recherche Scientifique (CNRS), 2006-2007
- Anarctic Service Medal, 2000-2001
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Administrative Appointments
- Chair, Biological Sciences, 07/01/2007 – 06/30/2017
- Director, Marine Environmental Biology Section of BISC, 2003 – 2006
Committees
- Co-Chair, Natural Sciences and Engineering sub-committee, USC University Committee on Appointment, Promotion and Tenure, 2004 – 2006
- Member, Natural Sciences and Engineering sub-committee,USC University Committee on Appointment, Promotion and Tenure, 2001 – 2004
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Administative Appointment
- Chief Scientist, RV Atlantis cruise AT 15-61 Jan 28, 2010 – Mar 3, 2010, Eastern Tropical South Pacific, 2009-2010
Conferences Organized
- Co-organizer, Colloquium on Climate Change in the Southern California Region, Davidson Center, USC, 10/2011 –
- Organizer, Climate change in the Southern California Bight, USC, 2010-2011
Editorships and Editorial Boards
- Member, Faculty of 1000, 08/2008 –
- Editor, Aquatic Microbial Ecology, 2007 –
- Board of Editors, mBio Am. Soc. Microbiol. on line open access journal, 08/2011 – 07/2014
- Editorial Board, Applied and Environmental Microbiology, 1993 – 2010
Professional Offices
- Secretary, International Symposium on Environmental Biogeochemistry, 1997 – 2012
Professional Memberships
- American Geophysical Union, 1995 – 2010
- Americal Society of Limnology and Oceanography, 1975 – 2010
- American Association for the Advancement of Science, 1975 – 2010
- American Society for Microbiology, 1975 – 2010