{"id":214,"date":"2023-07-10T11:40:07","date_gmt":"2023-07-10T18:40:07","guid":{"rendered":"https:\/\/live-usc-dornsife.pantheonsite.io\/pombenet\/?page_id=214"},"modified":"2024-08-20T15:12:16","modified_gmt":"2024-08-20T22:12:16","slug":"bioneer-reports","status":"publish","type":"page","link":"https:\/\/dornsife.usc.edu\/pombenet\/bioneer-reports\/","title":{"rendered":"Bioneer deletion libraries"},"content":{"rendered":"\n\n \n \n\n\n\n\n\n\n\n
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Many in the community are using the Bioneer deletion sets. Inevitably with such a large resource, there will be issues or ambiguities. Have you found any errors or identified problems with the Bioneer libraries? Check the table for strains of interest, and fill in the\u00a0form<\/a>\u00a0if you’ve found something worth noting. WE’ll collate the data here and publish it regularly. We’ll also try to provide information from Bioneer about resolution of any issues.<\/p>\n

Bioneer Library Report<\/h2>\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n
SPAC number<\/th>\ngene name<\/th>\nthe problem<\/th>\nLibrary version<\/th>\nReported by<\/th>\nResolution<\/th>\n<\/tr>\n
SPAC15E1.03<\/td>\nrpl42<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPAC16C9.05<\/td>\ncph1<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPAC1805.06c<\/td>\nhem2<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPAC186.03<\/td>\n<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPAC18G6.02c<\/td>\nchp1<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPAC1F7.01c<\/td>\nspt6<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPAC20G8.09c<\/td>\n<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPAC222.04c<\/td>\nies6<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPAC222.12c<\/td>\natp2<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPAC222.12c<\/td>\natp2<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPAC22F8.11<\/td>\nplc1<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPAC23C4.09c<\/td>\n<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPAC23C4.11<\/td>\natp18<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPAC31G5.07<\/td>\n<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPAC3G9.08<\/td>\npng1<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPAC4A8.03c<\/td>\nptc4<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPAC4F8.03<\/td>\n<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPAC56F8.04c<\/td>\ncoq2<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPAC589.11<\/td>\nmug82<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPAC637.07<\/td>\nmoe1<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPAC644.07<\/td>\n<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPAC664.13<\/td>\n<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPAC6C3.04<\/td>\ncit1<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPAC6F6.03c<\/td>\n<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPAC824.07<\/td>\n<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPAC890.07c<\/td>\nrmt1<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPAC8C9.03<\/td>\ncgs1<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPAC926.09c<\/td>\nfas1<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPAP27G11.10c<\/td>\nnup184<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPBC119.06<\/td>\nsco1<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPBC13E7.04<\/td>\natp16<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPBC146.09c<\/td>\nlsd1<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPBC16C6.02c<\/td>\nvps1302<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPBC16D10.02<\/td>\ntrm11<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPBC16H5.03c<\/td>\nfub2<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPBC17G9.02c<\/td>\n<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPBC17G9.09<\/td>\ntif213<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPBC18E5.04,<\/td>\nrpl1001<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPBC18H10.02<\/td>\nlcf1<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPBC19C2.14<\/td>\nsmd3<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPBC19G7.02<\/td>\n<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPBC21D10.11c<\/td>\nnfs1<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPBC26H8.12<\/td>\n<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPBC29A3.18<\/td>\ncyt1<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPBC30D10.13c<\/td>\npdb1<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPBC32F12.06<\/td>\npch1<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPBC36B7.03<\/td>\nsec63<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPBC405.04c<\/td>\nypt7<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPBC409.03<\/td>\nswi5<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPBC409.07c<\/td>\nwis1<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPBC530.01<\/td>\ngyp1<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPBC577.06c<\/td>\n<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPBP23A10.10<\/td>\nppk32<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPCC162.01c<\/td>\n<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPCC1682.16<\/td>\nrpt4<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPCC1840.02c<\/td>\nbgs4<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPCC1919.03c<\/td>\n<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPCC1919.09<\/td>\ntif6<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPCC285.09c<\/td>\ncgs2<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPCC297.03<\/td>\nssp1<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPCC306.04c<\/td>\nset1<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPCC31H12.08c<\/td>\nccr4<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPCC4B3.12<\/td>\nset9<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n
SPCC553.08c<\/td>\n<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPCC63.02c,<\/td>\naah3<\/td>\nCould not be revived<\/td>\n<\/td>\nHenry Levin<\/td>\nReplaced by Bioneer<\/td>\n<\/tr>\n
SPCC663.01c<\/td>\nekc1<\/td>\nNot deleted<\/td>\n2<\/td>\nHenry Levin<\/td>\n<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n

 <\/p>\n