{"id":468,"date":"2023-11-13T09:44:21","date_gmt":"2023-11-13T17:44:21","guid":{"rendered":"https:\/\/dornsife.usc.edu\/caron\/?page_id=468"},"modified":"2023-11-13T09:55:32","modified_gmt":"2023-11-13T17:55:32","slug":"moore-publications","status":"publish","type":"page","link":"https:\/\/dornsife.usc.edu\/caron\/moore-publications\/","title":{"rendered":"Comparative Functional Analyses of Mixotrophy among Microbial Eukaryotes"},"content":{"rendered":"\n\n  \n    \n\n\n\n\n\n\n<div\n  class=\"cc--component-container cc--rich-text \"\n\n  \n  \n  \n  \n  \n  \n  >\n  <div class=\"c--component c--rich-text\"\n    \n      >\n\n    \n      \n<div class=\"f--field f--wysiwyg\">\n\n    \n  <h4>Publications related to this project<\/h4>\n<div>\n<p>Please click on the \u201cpdf\u201d link after each individual reference to open the publication in a new tab in your browser window.<\/p>\n<table cellspacing=\"1\" cellpadding=\"5\" align=\"center\">\n<tbody>\n<tr>\n<td style=\"background-color: white; border: none;\"><strong>2017<\/strong><\/td>\n<\/tr>\n<tr>\n<td style=\"background-color: white; border: none;\">Terrado, R., A.L. Pasulka, A.A.Y. Lie, V.J. Orphan, K.B. Heidelberg and D.A. Caron. 2017. Autotrophic and heterotrophic acquisition of carbon and nitrogen by a mixotrophic chrysophyte established through stable isotope analysis. The ISME Journal. DOI: 10.1038\/ismej.2017.68. <a href=\"https:\/\/dornsife.usc.edu\/caron\/wp-content\/uploads\/sites\/263\/2023\/11\/2017_Terrado_etal_BG1_NanoSIMS.pdf\" target=\"_blank\" rel=\"noopener\">pdf<\/a><\/td>\n<\/tr>\n<tr>\n<td style=\"background-color: white; border: none;\">Lie, A.A.Y., Z. Liu, R. Terrado, A.O. Tatters, K.B. Heidelberg and D.A. Caron. 2017. Effect of light and prey availability on gene expression of the mixotrophic chrysophyte,\u00a0<em>Ochromonas\u00a0<\/em>sp. BMC Genomics. 18: 163. DOI: 10.1186\/s12864-017-3549-1. <a href=\"https:\/\/dornsife.usc.edu\/caron\/wp-content\/uploads\/sites\/263\/2023\/11\/2017_Lie_etal_Ochromonas_Transcriptomics.pdf\" target=\"_blank\" rel=\"noopener\">pdf<\/a><\/td>\n<\/tr>\n<tr>\n<td style=\"background-color: white; border: none;\">Stoecker, D.K., P.J. Hanse, D.A. Caron and A. Mitra. 2017. Mixotrophy in the marine plankton. Annual Reviews of Marine Sciences. 9: 311-335. <a href=\"https:\/\/dornsife.usc.edu\/caron\/wp-content\/uploads\/sites\/263\/2023\/11\/2017_Stoecker_etal_Mixo_Rev_ARMS.pdf\" target=\"_blank\" rel=\"noopener\">pdf<\/a><\/td>\n<\/tr>\n<tr>\n<td style=\"background-color: white; border: none;\">Caron, D.A. 2017. Acknowledging and incorporating mixed nutrition into aquactic protistan ecology, finally. Environmental Microbiology Reports. 9: 41-43. <a href=\"https:\/\/dornsife.usc.edu\/caron\/wp-content\/uploads\/sites\/263\/2023\/11\/2017_Caron_Mixo_CrystalBall_EMR.pdf\" target=\"_blank\" rel=\"noopener\">pdf<\/a><\/td>\n<\/tr>\n<tr>\n<td style=\"background-color: white; border: none;\">Liu, Z., S.K. Hu, V. Campbell, A.O. Tatters, K.B. Heidelberg and D.A. Caron. 2017. Single-cell transcriptomics of small microbial eukaryotes: insights and limitations. The ISME Journal. DOI: 10.1038\/ismej.2016.190. <a href=\"https:\/\/dornsife.usc.edu\/caron\/wp-content\/uploads\/sites\/263\/2023\/11\/2017_Liu_SingleCell_Transcrip.pdf\" target=\"_blank\" rel=\"noopener\">pdf<\/a><\/td>\n<\/tr>\n<tr>\n<td style=\"background-color: white; border: none;\"><strong>2016<\/strong><\/td>\n<\/tr>\n<tr>\n<td style=\"background-color: white; border: none;\">Caron, D.A., H. Alexander, A.E., J. M. Archibald, E.V. Armbrust, C. Bachy, A. Bharti, C.J. Bell, S.T. Dyhrman, S. Guida, K.B. Heidelberg, J.Z. Kaye, J. Metzner, S.R. Smith and A.Z. Worden. 2016. Probing the evolution, ecology and physiology of marine protists using transcriptomics. Nature Reviews Microbiology. DOI: 10.1038\/nrmicro.2016.160.\u00a0 <a href=\"https:\/\/dornsife.usc.edu\/caron\/wp-content\/uploads\/sites\/263\/2023\/11\/2016_Caron_etal_NRM.pdf\" target=\"_blank\" rel=\"noopener\">pdf<\/a><\/td>\n<\/tr>\n<tr>\n<td style=\"background-color: white; border: none;\">Mitra, A., K.J. Flynn, U. Tillmann, J. Raven, D. Caron, D. Stoecker, F. Not, P. Hansen, G. Hallegraeff,\u00a0 R. Sanders, S. Wilken, G. McManus, M. Johnson, P. Pitta, S. V\u00e5ge, R. Berje, A. Calbet, F. Thingstad, J.J. Jeong, J. Burkholder, P. Glibert, E. Gran\u00e9li and V. Lundgren.\u00a0 2016.\u00a0 Defining planktonic protist functional groups on mechanisms for energy and nutrient acquisition; incorporation of diverse mixotrophic strategies. Protist.\u00a0 167: 106-120.\u00a0 <a href=\"https:\/\/dornsife.usc.edu\/caron\/wp-content\/uploads\/sites\/263\/2023\/11\/2016_Mitra_etal_Mixotrophy_Protist.pdf\" target=\"_blank\" rel=\"noopener\">pdf<\/a><\/td>\n<\/tr>\n<tr>\n<td style=\"background-color: white; border: none;\">Liu, Z., V. Campbell, K. Heidelberg and D.A. Caron.\u00a0 2016.\u00a0 Gene expression characterizes\u00a0 different nutritional strategies among three mixotrophic protists.\u00a0 FEMS Microbiology Ecology. 92: fiw106.\u00a0 <a href=\"https:\/\/dornsife.usc.edu\/caron\/wp-content\/uploads\/sites\/263\/2023\/11\/Liu_et_al_2016_FEMS_Microb_Ecol.pdf\" target=\"_blank\" rel=\"noopener\">pdf<\/a><\/td>\n<\/tr>\n<tr>\n<td style=\"background-color: white; border: none;\">Caron, D.A.\u00a0 2016.\u00a0 Mixotrophy stirs up our understanding of marine food webs.\u00a0 Proceedings of the Academy of National Sciences of the U.S.\u00a0 113 (11): 2806-2808.\u00a0 <a href=\"https:\/\/dornsife.usc.edu\/caron\/wp-content\/uploads\/sites\/263\/2023\/11\/2016_Caron_PNAS_Commentary.pdf\" target=\"_blank\" rel=\"noopener\">pdf<\/a><\/td>\n<\/tr>\n<tr>\n<td style=\"background-color: white; border: none;\"><strong>2015<\/strong><\/td>\n<\/tr>\n<tr>\n<td style=\"background-color: white; border: none;\">Liu, Z., A.C. Jones, V. Campbell, K.D. Hambright, K.B. Heidelberg and D.A. Caron, Gene expression in the mixotrophic prymnesiophyte, <em>Prymnesium parvum<\/em>, responds to prey availability. <em>Frontiers in Microbiology<\/em> <strong>6<\/strong> (2015).\u00a0 DOI: 10.3389\/fmicb.2015.00319.\u00a0 <a href=\"https:\/\/dornsife.usc.edu\/caron\/wp-content\/uploads\/sites\/263\/2023\/11\/2015_Liu_Frontiers_PrymPrey.pdf\" target=\"_blank\" rel=\"noopener\">pdf<\/a><\/td>\n<\/tr>\n<tr>\n<td style=\"background-color: white; border: none;\">Liu, Z., A.E. Koid, R. Terrado, V. Campbell, D.A. Caron and K.B. Heidelberg.\u00a0 2015. \u00a0Changes in gene expression of <em>Prymnesium parvum<\/em> due to nitrogen and phosphorus limitation.\u00a0 Frontiers in Microbiology, Aquatic Microbiology. Vol. 6.\u00a0 DOI: 10.3389\/fmicb.2015.00631. <a href=\"https:\/\/dornsife.usc.edu\/caron\/wp-content\/uploads\/sites\/263\/2023\/11\/2015_Liu_etal_Prym_NPlim.pdf\" target=\"_blank\" rel=\"noopener\">pdf<\/a><\/td>\n<\/tr>\n<tr>\n<td style=\"background-color: white; border: none;\"><strong>2014<\/strong><\/td>\n<\/tr>\n<tr>\n<td style=\"background-color: white; border: none;\">Keeling, P.J. and 78 others.\u00a0 2014.\u00a0 The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP):\u00a0 Illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing. \u00a0PLOS Biology.\u00a0 12: e1001889.<\/td>\n<\/tr>\n<tr>\n<td style=\"background-color: white; border: none;\">Koid, A.E., A, Jones, Z. Liu, D.A. Caron and K.B. Heidelberg.\u00a0 2014.\u00a0 Comparative transcriptomics of four prymnesiophyte algae.\u00a0 PLoS One. \u00a09: e97801.\u00a0 <a href=\"https:\/\/dornsife.usc.edu\/caron\/wp-content\/uploads\/sites\/263\/2023\/11\/2014_Koid_etal_PLoSONE_4Haptos.pdf\" target=\"_blank\" rel=\"noopener\">pdf<\/a><\/td>\n<\/tr>\n<tr>\n<td style=\"background-color: white; border: none;\"><strong>2013<\/strong><\/td>\n<\/tr>\n<tr>\n<td style=\"background-color: white; border: none;\">Caron, D.A. and D.A. Hutchins.\u00a0 2013.\u00a0 The effects of changing climate on microzooplankton grazing and community structure: drivers, predictions and knowledge gaps.\u00a0 Journal of Plankton Research. \u00a035: 235-252.\u00a0 <a href=\"https:\/\/dornsife.usc.edu\/caron\/wp-content\/uploads\/sites\/263\/2023\/11\/2013_Rose_etal_PolarBiol.pdf\" target=\"_blank\" rel=\"noopener\">pdf<\/a><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<\/div>\n<p>&nbsp;<\/p>\n<h3>Dornsife news:<\/h3>\n<h5 class=\"cf\"><a href=\"https:\/\/dornsife.usc.edu\/news\/stories\/1768\/venus-flytrap-of-the-sea\/\" target=\"_blank\" rel=\"noopener\">Venus Flytrap of the Sea<\/a><\/h5>\n<p class=\"story-sub-title\"><em><a href=\"https:\/\/dornsife.usc.edu\/news\/stories\/1768\/venus-flytrap-of-the-sea\/\"><img loading=\"lazy\" decoding=\"async\" class=\" wp-image-474 alignleft\" style=\"margin-left: 0; margin-right: 15px; margin-bottom: 0;\" src=\"https:\/\/dornsife.usc.edu\/caron\/wp-content\/uploads\/sites\/263\/2023\/11\/8-300x200.jpg\" alt=\"\" width=\"239\" height=\"159\" srcset=\"https:\/\/dornsife.usc.edu\/caron\/wp-content\/uploads\/sites\/263\/2023\/11\/8-300x200.jpg 300w, https:\/\/dornsife.usc.edu\/caron\/wp-content\/uploads\/sites\/263\/2023\/11\/8-1024x683.jpg 1024w, https:\/\/dornsife.usc.edu\/caron\/wp-content\/uploads\/sites\/263\/2023\/11\/8-768x512.jpg 768w, https:\/\/dornsife.usc.edu\/caron\/wp-content\/uploads\/sites\/263\/2023\/11\/8-900x600.jpg 900w, https:\/\/dornsife.usc.edu\/caron\/wp-content\/uploads\/sites\/263\/2023\/11\/8.jpg 1200w\" sizes=\"(max-width: 239px) 100vw, 239px\" \/><\/a>A study funded by the Moore Foundation explores how a species of marine organisms acquires nutrition, which could lead to better understanding of harmful algal blooms.<\/em><\/p>\n<p class=\"story-byline\"><strong>\u00a0 By Richard Hoops<\/strong> &#8211; June 19, 2014<\/p>\n<p>&nbsp;<\/p>\n<hr style=\"color: #00000012;\" \/>\n<p>&nbsp;<\/p>\n<h4>For more information, please see:<\/h4>\n<p><a class=\"cta-link\" href=\"https:\/\/dornsife.usc.edu\/caron\/moore-mixotrophy\/\" target=\"_self\">Project overview<\/a><\/p>\n<p><a class=\"cta-link\" href=\"https:\/\/dornsife.usc.edu\/caron\/moore-objective\/\">Project objectives<\/a><\/p>\n<p><a class=\"cta-link\" href=\"https:\/\/dornsife.usc.edu\/caron\/moore-publications\/\">Publications related to this project<\/a><\/p>\n<p><a class=\"cta-link\" href=\"https:\/\/dornsife.usc.edu\/caron\/moore-protocols-sequence\/\" target=\"_self\">Protocols &amp; sequence data<\/a><\/p>\n<p><a class=\"cta-link\" href=\"https:\/\/dornsife.usc.edu\/caron\/moore-gallery\/\">Video<\/a><\/p>\n<p>&nbsp;<\/p>\n\n\n\n<\/div>\n\n\n  <\/div><\/div>\n","protected":false},"excerpt":{"rendered":"","protected":false},"author":584,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"page-content-detail.php","meta":{"_acf_changed":false,"footnotes":""},"class_list":["post-468","page","type-page","status-publish","hentry"],"acf":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.1.1 - 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