{"id":390,"date":"2023-09-08T13:26:48","date_gmt":"2023-09-08T20:26:48","guid":{"rendered":"https:\/\/live-usc-dornsife.pantheonsite.io\/agilentcoe\/?page_id=390"},"modified":"2024-10-29T14:22:33","modified_gmt":"2024-10-29T21:22:33","slug":"publications","status":"publish","type":"page","link":"https:\/\/dornsife.usc.edu\/agilentcoe\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"\n\n  \n    \n\n\n\n\n\n\n<div\n  class=\"cc--component-container cc--rich-text \"\n\n  \n  \n  \n  \n  \n  \n  >\n  <div class=\"c--component c--rich-text\"\n    \n      >\n\n    \n      \n<div class=\"f--field f--wysiwyg\">\n\n    \n  <h3 style=\"text-align: left;\">List of selected publications presenting results obtained using Agilent Center of Excellence instrumentations and technologies:<\/h3>\n<ul>\n<li>Eremina, O.E.; Vazquez, C.; Larson, K. N.; Mouchawar, A.; Fernando, A.; Zavaleta, C. &#8220;The evolution of immune profiling: will there be a role for nanoparticles?&#8221; <em>Nanoscale Horiz.<\/em>, <strong>2024<\/strong>, DOI: 10.1039\/d4nh00279b.<\/li>\n<li>Judd, K. D.; Parsons, S.W.; Eremin, D. B.; Fokin, V. V.; Dawlaty, J. M. \u201cVisualizing partial solvation at the air\u2013water interface\u201d <em> Sci.<\/em>, <strong>2024<\/strong>, 15, 8346\u20138354. DOI: 10.1039\/d4sc01311e.<\/li>\n<li>Grotsch, K.; Sadybekov, A. V.; Hiller, S.; Zaidi, S.; Eremin, D.; Le, A.; Liu, Y.; Smith. E. C.; Illiopoulos-Tsoutsouvas, Ch.; Thomas, J.; Aggarwal, Sh.; Pickett, J. E.; Reyes, C.; Picazo, E.; Roth, B. L.; Makriyannis, A.; Katritch, V.; Fokin, V.V. \u201cVirtual Screening of a Chemically Diverse \u201cSuperscaffold Library Enables Ligand Discovery for a Key GPCR Target\u201d <em>ACS Chem. Biol<\/em>.,<strong> 2024<\/strong>, 19, 4, 866\u2013874.<\/li>\n<li>Kumar, G.; Kellogg, M.; Dey, S.; Oliver, T. A. A.; Bradforth, S. E. Unraveling the Photoionization Dynamics of Indole in Aqueous and Ethanol Solutions.\u00a0<em> Phys. Chem. B,<\/em><strong>2024<\/strong>,\u00a0<em>128<\/em>\u00a0(17), 4158\u20134170.<\/li>\n<li>Balana, T. B.; Mahul-Mellier, A. L.; Nguyen, B.A.; Horvath, M.; Javed. A.; Hard, E. R.; Jasiqi, Y. J.; Singh, P.; Afrin, Sh.; Pedretti, R.; Singh, V.; Lee, V. M. Y.; Luk, K. C.; Saelices, L.; Lashuel, H. A.; Pratt, M. R. \u201cO-GlcNAc forces an \u03b1-Synuclein amyloid strain with notably diminished seeding activity and pathology\u201d <em>Nature Chemical biology<\/em>, <strong>2024<\/strong>, 20, 646-65.<\/li>\n<li>Bagheri, P.; Eremina, O.E.; Fernando, A.; Kamal, M.; Stegis, I.; Vazquez, C.; Shishido, S.N.; Kuhn, P.; Zavaleta, C. \u201cA Systematic Approach toward Enabling Maximal Targeting Efficiency of Cell Surface Proteins with Actively Targeted SERS Nanoparticles\u201d <em>Appl. Mater. Interfaces,<\/em>\u00a0<strong>2024<\/strong>, 16, 13, 15847\u201315860<\/li>\n<li>Suzuki, I.; Xing, H.; Giblin, J.; Ashraf, A.; Chung, E. J. Nanoparticle-based Therapeutic Strategies for Mitochondrial Dysfunction in Cardiovascular Disease. <em>JBMR-A<\/em>, <strong>2024<\/strong>. DOI: https:\/\/doi.org\/10.1002\/jbm.a.37668<\/li>\n<li>Czaia, A.; Awad, S.; Eremina, O.E.; Fernando, A.; Zavaleta, C. \u201cAssessment of unmixing approaches for the quantitation of SERS nanoparticles in highly multiplexed spectral images\u201d\u00a0<em>J Raman Spectrosc,\u00a0<\/em><strong>2024<\/strong>, 55:566\u2013580.<\/li>\n<li><a href=\"https:\/\/www.scopus.com\/authid\/detail.uri?authorId=57191991115\"><span style=\"font-weight: var(--font-weight, normal); font-style: var(--font-style, normal);\">Coradini, A.L.V.<\/span><\/a>;\u00a0<a href=\"https:\/\/www.scopus.com\/authid\/detail.uri?authorId=57215964638\"><span style=\"font-weight: var(--font-weight, normal); font-style: var(--font-style, normal);\">Ville, C.N.<\/span><\/a>;\u00a0<a href=\"https:\/\/www.scopus.com\/authid\/detail.uri?authorId=57217064130\"><span style=\"font-weight: var(--font-weight, normal); font-style: var(--font-style, normal);\">Krieger, Z.A.<\/span><\/a>; Roemer, J.; Hull, C.; Yang, Sh.; <a href=\"https:\/\/www.scopus.com\/authid\/detail.uri?authorId=58135537300\"><span style=\"font-weight: var(--font-weight, normal); font-style: var(--font-style, normal);\">Lusk<\/span>, D.T.<\/a>;\u00a0<a href=\"https:\/\/www.scopus.com\/authid\/detail.uri?authorId=12142718500\"><span style=\"font-weight: var(--font-weight, normal); font-style: var(--font-style, normal);\">Ehrenreich, I.M.<\/span><\/a> \u201cBuilding synthetic chromosomes from natural DNA\u201d <em>Nature Communications<\/em>, <strong>2023<\/strong>, 14:8337.<\/li>\n<li>Hsu, J.C.; Tang, Z.; Eremina, O.E.; Marios Sofias, A.; Lammers, T.; Lovell, J.F.; Zavaleta, C.; Cai, W.; Cormode, D.P.* \u201cNanomaterial-based contrast agents\u201d <em>Nature Reviews Methods Primers<\/em>,\u00a0<strong>2023<\/strong>, 3 (31).<\/li>\n<li>Strumolo, M.J.; Eremin, D.B.; Wang, S.; Perez, C.M.; Prezhdo, O. V.; Figueroa, J.S.; Brutchey, R. L. \u201cFormation of a P<sub>16<\/sub><sup>2\u2013<\/sup> Ink from Elemental Red Phosphorus in a Thiol\u2013Amine Mixture\u201d <em> Chem.<\/em> <strong>2023<\/strong>, <em>62, <\/em>6197-6201.<\/li>\n<li>Aggarwal, S.; Richards, W. J.; Fokin, V.V. \u201cGeneration and Aerobic Oxidation of Azavinyl Captodative Radicals\u201d <em>JACS<\/em>, <strong>2023<\/strong>, 145, 45, 24452-24458.<\/li>\n<li>Aggarwal, S.; Vu, A.; Eremin, D.B.; Persaud, R.; Fokin, V.V. \u201cArenes Participate in 1,3-Dipolar Cycloaddition with <em>in situ<\/em> Generated Diazoalkenes\u201d <em>Nat.\u00a0Chem.,<\/em> <strong>2023<\/strong>, 15(6), 764-772.<\/li>\n<li><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/?term=Koskela+KM&amp;cauthor_id=36248230\">Koskela<\/a>, K.M.;\u00a0<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/?term=Mora+Perez+C&amp;cauthor_id=36248230\">Perez<\/a>, C.M.;\u00a0<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/?term=Eremin+DB&amp;cauthor_id=36248230\">Eremin<\/a>, D.B.;\u00a0<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/?term=Evans+JM&amp;cauthor_id=36248230\">Evans<\/a>, J.M.; <a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/?term=Strumolo+MJ&amp;cauthor_id=36248230\">Strumolo<\/a>, M.J.; <a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/?term=Lewis+NS&amp;cauthor_id=36248230\">Lewis<\/a>, N.S.; <a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/?term=Prezhdo+OV&amp;cauthor_id=36248230\">Prezhdo<\/a>, O.V.;\u00a0<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/?term=Brutchey+RL&amp;cauthor_id=36248230\">Brutchey<\/a>, R.L. \u201cPolymorphic Control of Solution-Processed Cu<sub>2<\/sub>SnS<sub>3<\/sub>\u00a0Films with Thiol-Amine Ink Formulation\u201d <em>Chem. Mater<\/em>. <strong>2022<\/strong>, 34, 8654\u22128663.<\/li>\n<li>Nshimiyimana, R.; Lam, T.F.; Aggarwal, Sh.; Serhan, Ch.N.; and Petasis, N.A. \u201cFirst stereoselective total synthesis of 4(S),5(S)- oxido-17(S)-hydroxy6(E),8(E),10(Z),13(Z),15(E),19(Z)-docosahexaenoic acid, the biosynthetic precursor of resolvins D3 and D4\u201d <em>RSC Adv.<\/em>, <strong>2022<\/strong>, 12, 11613\u201311618.<\/li>\n<li>Kim,\u00a0E.;\u00a0Cardosa,\u00a0G. B.;\u00a0Stanley, K. E.;\u00a0Williams, T. J.;\u00a0McCurry, D. L.\u00a0\u201cOut of Thin Air? Catalytic Oxidation of Trace Aqueous Aldehydes with Ambient Dissolved Oxygen\u201d <em>Environ. Sci. Technol.<\/em>\u00a0<strong>2022, <\/strong>56, 12, 8756-8764.<\/li>\n<li>Grindel, B. J.; Engel, B. J.; Ong, J. N.; Srinivasamani, A.; Liang, X.; Zacharias, N. M.; Bast Jr., R. C.; Curran, M. A.; Takahashi, T. T.; Roberts, R. W. and Millward, S. W. \u201cDirected Evolution of PD-L1-Targeted Affibodies by mRNA Display\u201d <em>ACS Chem. Biol. <\/em><strong>2022<\/strong><em>, <\/em>17(6): 1543-1555.<\/li>\n<li>Lin, W. S.; Evenson, W. E.; Bostic, W. K. V.; Roberts, R. W. and Malmstadt N. \u201cCompatibility of Popular Three-Dimensional Printed Microfluidics Materials with In Vitro Enzymatic Reactions\u201d <em>ACS Appl. Bio Mater.<\/em>\u00a0<strong>2022<\/strong>, 5, 2, 818\u2013824.<\/li>\n<li>Eremina, O.E.; Salinas, H.R.; Miyasato, D.L.; Perez, R.; Gonzalez, K.L.; Czaja, A.T.; Burkitt, S.; Aron, A.; Fernando, A.; Ojeda, L.S.; Larson, K.; Mohamed, A.W.; Campbell, J.L.; Goins, B.A.; Zavaleta, C. A Colorful Approach towards Developing New Nano-Based Imaging Contrast Agents for Improved Cancer Detection.\u00a0<i><strong>Biomater. Sci<\/strong>.<\/i>\u00a02021, 9, 482\u2013495.<\/li>\n<li>Cox, J. M.; Bain, M.; Kellogg, M.; Bradforth, S. E.; Lopez, S. A. Role of the Per\ufb02uoro E\ufb00ect in the Selective Photochemical Isomerization of Hexa\ufb02uorobenzene.\u00a0<strong><i>J. Am. Chem. Soc<\/i><\/strong>. 2021, 143, 18, 7002-7012.<\/li>\n<li>Miyamoto, Y.; Aggarwal, Sh.; Celaje, J.J. A.; Ihara, S.; Ang, J., Eremin, D. B.; Land, K. M.; Wrischnik, L. A.; Zhang, L.; Fokin, V. V.; Eckmann, L. Gold(I) Phosphine Derivatives with Improved Selectivity as Topically Active Drug Leads to Overcome 5\u2011Nitroheterocyclic Drug Resistance in Trichomonas vaginalis.\u00a0<i><strong>J. Med. Chem<\/strong>.<\/i>\u00a02021, 64, 10, 6608-6620.<\/li>\n<li>Eremina, O. E.; Eremin, D. B.; Czaja, A.; Zavaleta, C., Selecting Surface-Enhances Raman Spectroscopy Flavors for Multiplexed Imaging Applications: Beyond the Experiment,\u00a0<i><strong>J. Phys. Chem. Lett<\/strong>.<\/i>\u00a02021, 12, 23, 5564-5570.<\/li>\n<li>Eremin, D., Highlights from Faraday Discussion: Reaction Mechanisms in Catalysis, UK, 17<sup>th<\/sup>-19<sup>th<\/sup>\u00a0February 2021. DOI: 10.1039\/d1cc90180j,\u00a0<strong><i>Chem. Commun<\/i><\/strong>., Royal Society of Chemistry.<\/li>\n<li>Eremin, D. B.; Fokin, V. V., On-Water Selectivity Switch in Microdroplets in the 1,2,3-Triazole Synthesis from Bromoethenesulfonyl Fluoride.\u00a0<strong><i>J. Am. Chem. Soc<\/i><\/strong>. 2021,\u00a0<a title=\"DOI URL\" href=\"https:\/\/doi.org\/10.1021\/jacs.1c08879\">doi.org\/10.1021\/jacs.1c08879<\/a>.<\/li>\n<li>Eremin, D. B.; Fokin, V. V., Dual Electrospray Ionization Enhancement of Proteins Enabled by DMSO Supercharging Reagent,\u00a0<strong><i>J. Am. Soc. Mass Spectrom<\/i><\/strong>, 2021,\u00a0<a href=\"https:\/\/pubs.acs.org\/doi\/10.1021\/jasms.1c00280\">https:\/\/doi.org\/10.1021\/jasms.1c00280<\/a>.<\/li>\n<li>Bapat, R. A.; Su J.; Moradian-Oldak J. Co-Immunoprecipitation Reveals Interactions Between Amelogenin and Ameloblastin via Their Self-Assembly Domains.\u00a0<em><strong>Front physiol<\/strong>.<\/em>\u00a02020, 11:622086.<\/li>\n<li>Sahharova, L. T.; Gordeev, E. G.; Eremin, D. B.; Ananikov, V. P. Pd-Catalyzed Synthesis of Densely Functionalized Cyclopropyl Vinyl Sulfides Reveals the Origin of High Selectivity in a Fundamental Alkyne Insertion Step.\u00a0<i><strong>ACS Catal<\/strong>.<\/i>\u00a02020, 10, 9872-9888.<\/li>\n<\/ul>\n\n\n\n<\/div>\n\n\n  <\/div><\/div>\n","protected":false},"excerpt":{"rendered":"","protected":false},"author":181,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"page-content-detail.php","meta":{"_acf_changed":false,"footnotes":""},"class_list":["post-390","page","type-page","status-publish","hentry"],"acf":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.1.1 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Publications - Agilent Center of Excellence in Biomolecular Characterization<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/dornsife.usc.edu\/agilentcoe\/publications\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Publications - 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