Links

Here at USC

 

Department of Biological Sciences Marine Environmental Biology Program  http://dornsife.usc.edu/bisc/marine/graduate/

 

Department of Environmental Studies http://dornsife.usc.edu/enviro/

 

Microbial Observatory http://dornsife.usc.edu/labs/usc-microbial-observatory

 

SeaGrant http://www.usc.edu/org/seagrant/

 

Wrigley Institute for Environmental Studies http://dornsife.usc.edu/wrigley/home/index.cfm

 

 

Collaborating Laboratories

 

Caron Lab, USC http://dornsife.usc.edu/labs/caron/home/

 

Giovannoni Lab, OSU http://giovannonilab.science.oregonstate.edu/

 

Jones Lab, USC http://usclab.usc.edu/index.html

 

Martiny Lab, UCI http://www.ess.uci.edu/~amartiny/Site/Home.html

 

Noble Lab, UNC Chapel Hill http://marine.unc.edu/Research/noble

 

Orange County Sanitation District (OCSD) http://www.ocsd.com/default.asp

 

Rohwer Lab, SDSU http://phage.sdsu.edu/

 

Southern California Coastal Water Research Project (SCCWRP) http://www.sccwrp.org/Homepage.aspx

 

Sullivan Lab, UA http://eebweb.arizona.edu/faculty/mbsulli/index.htm

 

Suttle Lab, UBC http://www.ocgy.ubc.ca/~suttle/

 

Eric Wommack, UDEL http://www.virusecology.org/MOVE/Home.html

 

 

Microbial Observatories and Time Series Stations

 

Alaskan Soil Microbial Observatory, U WISC http://www.plantpath.wisc.edu/fac/joh/mo.htm

 

Alpine Microbial Observatory, CU-Boulder http://amo.colorado.edu/

 

Bermuda Atlantic Time-series Study (BATS) http://www.bios.edu/research/bats.html

 

BBSR Oceanic Microbial Observatory, BBSR/OSU/UCSB http://www.lifesci.ucsb.edu/~carlson/

 

Cedar Creek Natural History Area Microbial Observatory, UMN http://cedarcreek.umn.edu/microbo/index.htm

 

Duke Forest Mycological Observatory http://www.biology.duke.edu/fungi/mycolab/DFMO.html

 

Hawaiian Lakes Microbial Observatory, UH - Manoa http://www.hawaii.edu/microbiology/MO/hilakes.html

 

Hawaiian Ocean Time Sereies (HOT) / ALOHA, UH - Manoa http://hahana.soest.hawaii.edu/hot/

 

Microbial Observatory, USC http://dornsife.usc.edu/labs/usc-microbial-observatory

 

Microbial Observatory for Viroplankton Ecology (MOVE) http://www.virusecology.org/MOVE/Home.html

 

MOCAT - Tropical Microbial Observatory http://alrlab.pdx.edu/research/mocat/

 

North Temperate Lakes Microbial Observatory, U WISC LTER http://microbes.limnology.wisc.edu/

 

Prarie Soil Microbial Observatory, NIU http://jove.geol.niu.edu/faculty/lenczewski/Nachusa.html

 

Salt Plains Microbial Observatory, OK State http://www.okstate.edu/artsci/SPMO/

 

Sapelo Island Microbial Observatory, UGA http://simo.marsci.uga.edu/

 

Soap Lake Microbial Observatory, CWU http://www.cwu.edu/~pinkarth/

 

 

Online Resources

 

Aquatic Microbes Forum http://www.sb-roscoff.fr/marine_microbes/

 

ARB Project http://www.arb-home.de/

 

CAMERA - Moore Foundation Microbial Genome Sequencing Project http://camera.calit2.net/microgenome/

 

CRAN www.r-project.org

 

GenBank http://www.ncbi.nlm.nih.gov/genbank/index.html

 

Green Genes http://greengenes.lbl.gov/cgi-bin/nph-index.cgi

 

IBEST: Tools: T-RFLP Stats http://www.ibest.uidaho.edu/tools/trflp_stats/index.php

 

IDT Oligo Analyzer http://www.idtdna.com/analyzer/Applications/OligoAnalyzer/

 

Integrated Microbial Genomes System (IMG) http://img.jgi.doe.gov/cgi-bin/pub/main.cgi

 

International Census of Marine Microbes (ICOMM) http://icomm.mbl.edu/

 

MOTHUR http://www.mothur.org/

 

Ribosomal Database Project http://rdp.cme.msu.edu/index.jsp

 

Sorcerer II Expedition http://www.sorcerer2expedition.org/version1/HTML/main.htm